Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Low Dose Radiation Therapy and Convalescent Plasma: How a Hybrid Method May Maximize Benefits for COVID-19 Patients
387
394
EN
H
Abdollahi
0000-0003-0761-1309
PhD, Department of Radiologic Sciences and Medical Physics, Faculty of Allied Medicine, Kerman University of Medical Science, Kerman, Iran
hamid_rbp@yahoo.com
I
Shiri
PhD, Division of Nuclear Medicine and Molecular Imaging, Geneva University Hospital, CH-1211 Geneva 4, Switzerland
isaac.shiri@etu.unige.ch
J J
Bevelacqua
0000-0001-9561-8767
PhD, Bevelacqua Resources, Richland, Washington, United States
bevelresou@aol.com
A
Jafarzadeh
PhD, Department of Immunology, School of Medicine, Kerman University of Medical Science, Kerman, Iran
jafarzadeh14@yahoo.com
A
Rahmim
PhD, Departments of Radiology and Physics, University of British Columbia, Vancouver BC, Canada
arman.rahmim@ubc.ca
H
Zaidi
0000-0001-7559-5297
PhD, Division of Nuclear Medicine and Molecular Imaging, Geneva University Hospital, CH-1211 Geneva 4, Switzerland
habib.zaidi@hcuge.ch
S A R
Mortazavi
0000-0002-1563-6592
MD, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
alireza.mortazavi.med@gmail.com
S M J
Mortazavi
0000-0003-0139-2774
PhD, Department of Medical Physics, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
mortazavismj@gmail.com
10.31661/jbpe.v0i0.2006-1125
Physicians and scientists around the world are aggressively attempting to develop effective treatment strategies. The treatment goal is to reduce the fatality rate in 15% to 20% of individuals infected with SARS-CoV-2 who develop severe inflammatory conditions that can lead to pneumonia, and acute respiratory distress syndrome. These conditions are major causes of death in these patients. Convalescent plasma (CP) collected from patients recovered from the novel corona virus disease (COVID-19) has been considered as an effective treatment method for COVID-19. Moreover, low-dose radiation therapy (LDRT) for COVID-19 pneumonia was historically used to treat pneumonia during the first half of the 20th century. The concept of LDRT for COVID-19 pneumonia was first introduced in March 2020. Later scientists from Canada, Spain, United States, Germany and France also confirmed the potential efficacy of LDRT for treatment of COVID-19 pneumonia. The rationale behind introducing LDRT as an effective treatment method for pneumonia in COVID-19 patients is not only due to its anti-inflammatory effect, but also in optimization of the activity of the immune system. Moreover, LDRT, unlike other treatment methods such as antiviral drugs, does not have the key disadvantage of exerting a significant selective pressure on the SARS-CoV-2 virus and hence does not lead to evolution of the virus through mutations. Given these considerations, we believe that a hybrid treatment including both CP and LDRT can trigger synergistic responses that will help healthcare providers in mitigating today’s COVID-19 pandemic.
Low Dose Radiation,Radiotherapy,COVID-19,Convalescent plasma,Anti-inflammatory responses,Immune system,Selective Pressure,Mutations
https://jbpe.sums.ac.ir/article_46633.html
https://jbpe.sums.ac.ir/article_46633_8cc1342d5ab6ca9c7fcdb0457485a667.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
X-Ray Beam Segment Size and Entrance Location Effects on the Integral Quality Monitor (IQM®) Signal and Usefulness in Predicting Complex Segment Output Signals
395
410
EN
C
Mahuvava
0000-0003-3438-6864
PhD, Medical Physics Department, Faculty of Health Sciences, University of the Free State,
P.O. Box 339, Bloemfontein, 9300 South Africa
F C P
Du Plessis
0000-0001-6250-0914
PhD, Medical Physics Department, Faculty of Health Sciences, University of the Free State,
P.O. Box 339, Bloemfontein, 9300 South Africa
duplessisfcp@ufs.ac.za
10.31661/jbpe.v0i0.1162
Background: The Integral Quality Monitor (IQM®) is an independent online dosimetry device attached to the treatment machine to monitor the accuracy of radiation delivery. <br />Objective: This study investigates the influence of beam segment size and displacement as projected onto the IQM chamber on the signals and determine how individual signals can be added to get a combined segment signal made up of smaller segments.<br />Material and Methods: This is an experimental original research type of study. IQM response maps were generated by irradiating the IQM sensitive area with small elementary segments and measuring their corresponding signals per monitor unit (MU). The output signal/MU was measured for regular and irregular fields and compared with the predicted signal/MU obtained from decomposing the open segment into a set of smaller regular segments and summing their signals from their respective response maps. The dependence of signals on segment size, shape, location and combination was investigated. <br />Results: Predicted signals were calculated within 95-98 % accuracy for regular fields and 90-98% for irregular fields. More uniform fluence contain distribution for larger segments was observed. Response maps were consistent with the geometrical symmetry in the chamber’s wedge shape and the symmetry in the linac fluence. <br />Conclusion: The field decomposition method allows the pre-calculation of known segment output signals per MU within 2% error, although the accuracy drops significantly for smaller, irregular fields. A method of correcting predicted signals in smaller segments needs to be laid down to get a better match with measured signals.
Integral Quality Monitor,Output Signal,Response Map,Fluence
https://jbpe.sums.ac.ir/article_46379.html
https://jbpe.sums.ac.ir/article_46379_f6f90cdbe033599012cc8a5903b186aa.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Comparing Lymphocyte Radiosensitivity of Prostate Cancer Patients with Healthy Donors Using Micronuclei and Chemical Premature Chromosome Condensation Tests
411
420
EN
F
Golfam
0000-0001-7288-2274
PhD, MD, Department of Medical Physics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
fargolfam@yahoo.com
B
Hashemi
0000-0002-2511-4376
PhD, Associate Professor, Department of Medical Physics, Tarbiat Modares University, Tehran, Iran
bhashemi@modares.ac.ir
A
Haeri
PhD, Assistant Professor, Nuclear Science and Technology Research Institute, Tehran, Iran
haeri80@gmail.com
A
Nikoofar
MD, Associate Professor, Department of Radiation Oncology, Firouzgar Hospital, Iran University of Medical Sciences, Tehran, Iran
arnikoofar@gmail.com
10.31661/jbpe.v0i0.657
Background: Cytogenetic tests are usually used for diagnosing predisposed individuals to cancer by determining their lymphocyte radiosensitivity.<br />Objective: To determine the potential role of radiosensitivity in predisposition of prostate cancer by comparing lymphocyte radiosensitivity of prostate cancer patients with healthy donors.<br />Materials and Methods: In this experimental study, the blood samples of 10 prostate cancer patients and 10 healthy donors were irradiated to 0.25, 0.5, 1, 2, 4 and 6 Gy ionizing radiation produced by a 6MV Linac. One sample of each group receiving no radiation was regarded as the background. The micronuclei (MN) and chemical premature chromosome condensation (PCC) cytogenetic tests were performed on all samples and the numbers of MN and PCC rings were scored. Dose-response curves were plotted for both healthy and cancerous groups with two tests.<br />Results: There was a significant difference between the numbers of MN within each group due to different levels of radiation doses. There was also a significant difference between the two groups in all identical doses, with the exception of 6 Gy. The chemical PCC test indicated a significant difference between the scored PCC rings in each group at doses higher than 0.25 Gy. However, no differences were noted between the healthy donors and prostate cancer patients receiving the same level of doses. <br />Conclusion: MN test can be considered as a reliable indicator of predisposition of prostate cancer. On the other hand, the chemical PCC test could not differentiate between healthy donors and prostate cancer patients at the dose range examined in this study.
Micronuclei Tests,Cytogenetic analysis,Radiation Tolerance,Dose-Response Relationship,Prostatic Neoplasms
https://jbpe.sums.ac.ir/article_44601.html
https://jbpe.sums.ac.ir/article_44601_d0c6c543d4b3e82b023bf79238011234.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
The Effect of Vitamin C on Apoptosis and Bax/Bcl-2 Proteins Ratio in Peripheral Blood Lymphocytes of Patients during Cardiac Interventional Procedures
421
432
EN
H
Nematollahi
0000-0002-0373-1795
MSc, Department of Radiology, Paramedical School, Shiraz University of Medical Sciences, Shiraz, Iran
Gh
Haddadi
0000-0002-1401-4951
PhD, Associate Professor, Department of Radiology, Paramedical School, Shiraz University of Medical Sciences, Shiraz, Iran
pira_radio4@sums.ac.ir
M V
Jorat
MD, Associate Professor, Cardiovascular Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
10.31661/jbpe.v0i0.917
Background: There is a close relationship between the effects of free radicals and apoptosis, and vitamin C is known as a potent scavenger of free radicals. <br />Objective: The aim of this study was to evaluate the effect of vitamin C against the radiation-induced apoptosis and the ratio of Bax/Bcl-2 proteins in peripheral blood lymphocytes in patients undergoing cardiac procedures in vivo condition.<br />Material and Methods: In this clinical intervention study, blood samples from 6 patients in the first group were taken to assess the effect of radiation on the apoptosis and Bax/Bcl-2 proteins ratio, and 5 patients as the second group to evaluate the effect of vitamin C on the apoptosis and Bax/Bcl-2 proteins ratio before and 24 hours after the examination. Flow cytometry was used to analyze the apoptosis and ELISA method to assess Bax and Bcl-2 proteins amount. <br />Results: In the second group receiving 25 mg/kg vitamin C and a mean skin dose of 1001 mGy in the chest area, there was no significant difference (P <0.05) in the percentage of early apoptosis in 24 hours after the examination than before it. This significant increase in the percentage of apoptosis in the first group (385.6 mGy) was associated with a significant increase in the Bax/Bcl-2 ratio (P <0.05), while in the second group, it was not associated with a significant decrease in the Bax/Bcl-2 ratio in 24 hours after the examination than before it. <br />Conclusion: Our results suggest that vitamin C may modulate Bax and Bcl-2 proteins expression, in maintaining peripheral blood lymphocytes in patients undergoing cardiology in radiation-induced apoptosis.
apoptosis,Bax,Bcl-2,Vitamin C,PCXMC,Enzyme-Linked Immunosorbent Assay,Flow cytometry,Radiation
https://jbpe.sums.ac.ir/article_44654.html
https://jbpe.sums.ac.ir/article_44654_78b1100e741a94874f6ceef96bc71aae.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Exposure to Electromagnetic Field during Gestation Adversely Affects the Electrophysiological Properties of Purkinje Cells in Rat Offspring
433
440
EN
M
Haghani
0000-0002-8225-6354
PhD, Histomorphometry and Stereology Research Centre, Shiraz University of Medical Sciences, Shiraz, Iran
V
Pouladvand
MSc, Department of Biochemical, Jiroft University of Medical Sciences, Jiroft, Kerman, Iran
shabani@kmu.ac.ir
S M J
Mortazavi
0000-0003-0139-2774
PhD, Ionizing and Non-Ionizing Radiation Protection Research Center, Paramedical School, Shiraz University of Medical Sciences, Shiraz, Iran
s.m.javad.mortazavi@fccc.edu
M
Razavinasab
PhD, Kerman Neuroscience Research Center, Neuropharmacology Institute, Kerman University of Medical Sciences, Kerman, Iran
razavimoaz@yahoo.com
M
Bayat
0000-0002-3279-6934
PhD, Clinical Neurology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
haghani@sums.ac.ir
M
Shabani
0000-0002-2082-5849
PhD, Kerman Neuroscience Research Center, Neuropharmacology Institute, Kerman University of Medical Sciences, Kerman, Iran
shabanimoh@yahoo.com
10.31661/jbpe.v0i0.560
Background: Prenatal adverse effects of radiofrequency electromagnetic fields (RF-EMF) exposure on nervous system are an issue of major concern.<br />Objective: Thus, in this study we evaluated the membrane current flow properties of Purkinje neurons after maternal exposure to 900 MHz pulsed RF-EMF.<br />Material and Methods: In this experimental study, during all days of pregnancy, rats in the EMF-exposed group were exposed to 900 MHz pulsed-EMF radiation for 6 h per day. The effects of RF-EMF exposure on the electrophysiological properties of the Purkinje cerebellum neurons from male pups were evaluated by whole-cell patch clamp recordings in current and voltage clamp modes. In voltage-clamp experiments, the holding potential was -60 mV, and a depolarizing voltage step (1000 ms duration) was applied from -60 to +50 mV in 10 mV increments at 2s intervals. <br />Results: The exposure group demonstrated reduced spontaneous firing associated with upward and rightward shift in I/V curve compared to the control rats. Moreover, the peak amplitude of the current for the exposure pups also revealed a significant decrement. The reversal potential was +40 mV and +20 mV for the control and RF-EMF groups, respectively and showed significant differences between the two groups. <br />Conclusion: The decrease in ion’s conductance could be attributed to the observed decrease in the voltage onset of the inward current, peak amplitude and voltage shift.
Electrophysiological Properties,Cell Phone,Purkinje cells,Prenatal Injuries
https://jbpe.sums.ac.ir/article_44626.html
https://jbpe.sums.ac.ir/article_44626_988d8ff7cfdbad66e1698d4b9825cf3b.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Evaluation of Therapeutic Properties of a Low Energy Electron Beam Plus Spoiler for Local Treatment of Mycosis Fungoides: A Monte Carlo Study
441
448
EN
S
Noshadi
0000-0002-9947-6660
MSc, Department of Medical Physics, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
s_tak2012@yahoo.com
M
Atarod
PhD, Department of Medical Physics and Radiology, Shahrekord University of Medical Sciences, Shahrekord, Iran
maryamatarod@yahoo.com
A
Amouheidari
MD, Department of Radiation Oncology, Milad Hospital, Isfahan, Iran
amouheidari@isfahanmiladhospital.ir
F
Felfeliyan
0000-0001-8399-3164
MSc, Department of Medical Physics, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
faranak.felfelian@yahoo.com
P
Shokrani
0000-0002-9023-1923
PhD, Department of Medical Physics, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
shokrani@med.mui.ac.ir
10.31661/jbpe.v0i0.712
Background: When using low-energy electron beams for the treatment of skin lesions, such as Mycosis Fungoides (MF), a beam spoiler is used to decrease electron therapeutic depth (R<sub>90</sub>) while increasing the surface dose.<br />Objective: The aim of this study was to evaluate the characteristics of a 5 MeV electron beam when using a spoiler for the local treatment of MF skin lesions by Monte Carlo (MC) simulation.<br />Material and Methods: In this experimental study, a Siemens Primus treatment head and an acrylic spoiler, positioned at the end of applicator, were simulated using BEAMnrc, an EGSnrc user code. The modelled beam was validated by measurement using MP3-M water tank, Roos parallel plate chamber and Semi flex Chamber-31013 (all from PTW, Freiburg, Germany). For different spoiler thicknesses, dose distributions in water were calculated for 2 field sizes and were compared to those for the corresponding open fields.<br />Results: For a 1.3 cm spoiler, therapeutic range changed from 1.5 cm (open field) to 0.5 cm and 0.4 cm for 10 × 10 cm<sup>2</sup> and 20 × 20 cm<sup><span>2</span></sup> field sizes, respectively. Maximum increase in penumbra width was 2.8 and 3.8 cm for 10 × 10 cm<sup>2</sup> and 20 × 20 cm<sup>2</sup> field sizes, respectively. Maximum increase in bremsstrahlung contamination was %2 in both field sizes.<br />Conclusion: R<sub>90</sub> decreased exponentially with increase in spoiler thickness. The effect of field size on penumbra was much larger for spoiled beam compared to the open beam. The results of this research can be applied to optimize the radiation treatment of MF patients in our hospital.
Penumbra,Spoiler,Electrons,Monte Carlo Method,Radiotherapy
https://jbpe.sums.ac.ir/article_44616.html
https://jbpe.sums.ac.ir/article_44616_a51138ead82400b3e35934908a1d774e.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Evaluation of Maximum and Minimum Signal Intensity and the Linear Relationship between Concentration and Signal Intensity in Saturation Recovery T1-weighted Images by use of a Turbo Fast Low-Angle Shot Sequence
449
458
EN
M
Nazarpoor
0000-0001-5635-8990
PhD, Associated Professor of Medical Physics, Department of Biomedical Engineering, Faculty of Health, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran
10.31661/jbpe.v0i0.823
Background: The relationship between the concentration of contrast agents and signal intensity (SI) are affected by some image parameters, phase-encoding scheme, magnetic field strength, image sequences, and iron oxide nanoparticles used and Gd-DTPA as MRI contrast agents. <br />Objective: In this article, the effect of saturation times (TSs) on the maximum and minimum SI, and also the linear relationship between the concentration of the contrast agent and SI are evaluated. Additionally, we evaluated the concentration of contrast agent that results the minimum SI using a saturation recovery TurboFLASH sequence. <br />Material and Methods: In this experimental study, a phantom was designed to hold vials with different concentrations of Gd-DTPA (0–19.77mmol/L). The mean SI was acquired from the nine central pixels of every vial at various TSs. <br />Results: This study shows that the maximum SI in an image is dependent on short TSs (up to 400ms) and independent of long TSs (400–1000ms). The result also shows that the concentration at which a maximum linear relationship between concentration and SI is maintained that gave an R<sup>2</sup> equal to 0.95 and 0.99 dependent on the TS. Moreover, the outcome demonstrates that as TS increases, the concentration of the contrast agent decreases. This causes SI to be minimized. <br />Conclusion: This study demonstrated that the TS is a key parameter for measuring the maximum and minimum SI and also TS plays the role in determining the maximum linear relationship between the MRI contrast agent concentration and SI in an in vivo perfusion study.
Magnetic Resonance Imaging,Saturation Recovery,T1-weighted,Signal Intensity,Saturation Time,Perfusion,Gadolinium DTPA
https://jbpe.sums.ac.ir/article_44655.html
https://jbpe.sums.ac.ir/article_44655_d146a3a6130823703a635753a9c57959.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
New MRI Finding in Migraineurs: Mesial Temporal Sclerosis
459
466
EN
M H
Bagheri
0000-0002-9273-5359
MD, Medical Imaging Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
bagherih@sums.ac.ir
R
Jalli
0000-0001-9167-4737
MD, Medical Imaging Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
jalli@sums.ac.ir
A
Hoseyni Moghadam
MD, Medical Imaging Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
10.31661/jbpe.v0i0.887
Background: Based on our experience, a noticeable number of migraineurs without history of epilepsy disclose mesial temporal sclerosis (MTS) on their brain MRI. <br />Objective: This prospective study was conducted to assess the frequency of MTS in migraineurs and also determine the ratio of unilateral and bilateral cases. <br />Material and Methods: In this cross sectional study, the frequency of MTS in MRI of 84 migraine patients, who had symptoms for at least 2 years, assessed. Brain MRI was done with T1 and T2 weighted protocols. Two radiologists separately interpreted findings, defining MTS as presence of any of hippocampal atrophy, increased T2 signal of hippocampus, decreased T1 signal of hippocampus or loss of internal architecture. Patients who radiologists had not agreement on their diagnoses excluded. Stat analysis done using ‘<em>N</em> - 1’ chi squared test. <br />Results: Eleven patients were excluded due to non-accordant interpretation of MRI findings by the two examining radiologists. MTS was detected in 14 out of 73 patients (19%). Bilateral involvement of mesial temporal lobe was seen in 6 (8%) patients (M: 67%, F: 33%). Five cases (7%) had unilateral left MTS (M: 67%, F: 33%) while 3 (4%) were affected with right-sided MTS (M: 33%, F: 67%). These findings highly suggest association of MTS and Migraine (P-value <0.0001). <br />Conclusion: While MTS is a prevalent finding in migraineurs, incidental finding of MTS in MRI should suspect physicians of migraine as well as temporal lobe epilepsy. MTS can be proposed as an etiology of migraine but most likely, consequence of it.
Hippocampal Sclerosis,Migraine Disorders,Magnetic Resonance Imaging,Epilepsy, Temporal Lobe
https://jbpe.sums.ac.ir/article_45717.html
https://jbpe.sums.ac.ir/article_45717_71a9391d9947b06205afcb2778cf9f48.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Identification of the Cognitive Interference Effect Related to Stroop Stimulation: Using Dynamic Causal Modeling of Effective Connectivity in Functional Near-Infrared Spectroscopy (fNIRS)
467
478
EN
M
Yousef Pour
0000-0002-9670-2685
PhD, School of Medicine, Aja university of Medical Science, Tehran, Iran
m.yousefpour@ajaums.ac.ir
S
Masjoodi
PhD, School of Medicine, Aja university of Medical Science, Tehran, Iran
sadeghmasjoodi@gmail.com
M
Fooladi
0000-0003-3119-7451
MSc, Department of Medical Physics and Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences(TUMS), Tehran, Iran
fooladi@razi.tums.ac.ir
M
Jalalvandi
MSc, Department of Medical Physics and Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences(TUMS), Tehran, Iran
R
Vosoughi
MSc, Department of Medical Physics and Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences(TUMS), Tehran, Iran
B
Vejdani Afkham
MSc, Department of Medical Physics and Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences(TUMS), Tehran, Iran
H
Khabiri
MSc, Department of Medical Physics and Biomedical Engineering, School of Medicine, Tehran University of Medical Sciences(TUMS), Tehran, Iran
10.31661/jbpe.v0i0.1174
Background: The Stroop test is a well-known model to denote the decline in performance under the incongruent condition, which requires selective attention and control of competitive responses. Functional near-infrared spectroscopy can identify activated brain regions associated with the Stroop interference effect.<br />Objective: This research aims to identify the neural correlates associated with the Stroop tasks within the brain activated regions.<br />Materials and Methods: In this cross sectional study, twelve right-handed healthy controls were investigated by means of a multi-channels fNIRS unit during the execution of the Stroop test. Effective connectivity changes in the prefrontal cortex between Stroop attentional conflict and rest states were calculated using DCM approach to investigate (1) areas known for selective attention and (2) analyze inter-network functional connectivity strength (FCS) by selecting several brain functional networks. <br />Results: The results indicated that an increased activity was recorded in the LDLPFC during incongruent condition, while under neutral condition, the increase in activity was even more pronounced in those areas. Effect of Stroop interference associated with significant consistent causes an increase in the RDLPFC to DMPFC, LDLPFC to DMPFC and LDLPFC to RPFC effective connectivity strengths.<br />Conclusion: This study showed the use of DCM algorithm for fNIRS data with respect to fMRI has provided additional information about the directional connectivity and causal interactions in LPFC networks during a conflict processing. Eventually, high temporal resolution fNIRS can be a promising tool for monitoring functional brain activation under the cognitive paradigms in neurological research and psychotherapy applications.
Stroop Test,Fnirs,Connectivity,Prefrontal Cortex,Attention
https://jbpe.sums.ac.ir/article_46300.html
https://jbpe.sums.ac.ir/article_46300_204bc22fb9f8cd70d6060ab0789c18be.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Predicting Lung Cancer Patients’ Survival Time via Logistic Regression-based Models in a Quantitative Radiomic Framework
479
492
EN
S P
Shayesteh
0000-0003-4122-0053
PhD, Department of Physiology, Pharmacology and medical physics, Faculty of Medicine, Alborz University of Medical Sciences, Karaj. Iran
I
Shiri
MSc, Department of Medical Physics, School of Medicine, Iran University of Medical Sciences (IUMS), Tehran, Iran
A H
Karami
PhD, Department of Medical Physics, School of Medicine, Iran University of Medical Sciences (IUMS), Tehran, Iran
amirhosein_karami@yahoo.com
R
Hashemian
MD, PhD, US oncology Inc, Cincinnati, OH, USA
rezahashemian@yahoo.com
S
Kooranifar
MD, Department of Pulmonary Sciences, Hazrat Rasoul Akram Hospital, Iran University of Medical Sciences (IUMS), Tehran, Iran
kooranifar@yahoo.com
H
Ghaznavi
0000-0002-4629-1697
MD, Zahedan University of Medical Sciences (ZaUMS), Zahedan, Iran
habib_ghaznavi@yahoo.com
A
Shakeri-Zadeh
PhD, Department of Medical Physics, School of Medicine, Iran University of Medical Sciences (IUMS), Tehran, Iran
shakeriz@iums.ac.ir
10.31661/jbpe.v0i0.1027
Background: Selection of the best treatment modalities for lung cancer depends on many factors, like survival time, which are usually determined by imaging. <br />Objectives: To predict the survival time of lung cancer patients using the advantages of both radiomics and logistic regression-based classification models.<br />Material and Methods: Fifty-nine patients with primary lung adenocarcinoma were included in this retrospective study and pre-treatment contrast-enhanced CT images were acquired. The patients lived more than 2 years were classified as the ‘Alive’ class and otherwise as the ‘Dead’ class. In our proposed quantitative radiomic framework, we first extracted the associated regions of each lung lesion from pre-treatment CT images for each patient via grow cut segmentation algorithm. Then, 40 radiomic features were extracted from the segmented lung lesions. In order to enhance the generalizability of the classification models, the mutual information-based feature selection method was applied to each feature vector. We investigated the performance of six logistic regression-based classification models. <br />Results: It was observed that the mutual information feature selection method can help the classifier to achieve better predictive results. In our study, the Logistic regression (LR) and Dual Coordinate Descent method for Logistic Regression (DCD-LR) models achieved the best results indicating that these classification models have strong potential for classifying the more important class (i.e., the ‘Alive’ class). <br />Conclusion: The proposed quantitative radiomic framework yielded promising results, which can guide physicians to make better and more precise decisions and increase the chance of treatment success.
Radiomics,Lung Cancer,Survival analysis,Computed Tomography
https://jbpe.sums.ac.ir/article_45726.html
https://jbpe.sums.ac.ir/article_45726_ee5e01534e3a4c6a1622eb450f9311f0.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Brain Functional Mechanisms in Attentional Processing Following Modified Conflict Stroop Task
493
506
EN
M
Jalalvandi
0000-0001-6065-8769
MSc, Department of Radiology, School of Medicine, AJA University of Medical Science, Tehran, Iran
mjalalvandi@ymail.com
M
ZahediNiya
0000-0003-0764-1268
MD, Department of Radiology, School of Medicine, AJA University of Medical Science, Tehran, Iran
drmzn45@gmail.com
J
Kargar
MD, Department of Radiology, School of Medicine, AJA University of Medical Science, Tehran, Iran
drjalal2012@yahoo.com
S A
Karimi
PhD, Neurophysiology Research Center, Hamadan University of Medical Sciences, Hamadan, Iran
H
Sharini
0000-0002-3375-2546
PhD, Department of Biomedical Engineering, School of Medicine, Kermanshah University of Medical Sciences (KUMS), Kermanshah, Iran
hamid.sharini@kums.ac.ir
N
Goodarzi
PhD, Department of clinical phycology, School of Medicine, AJA University of Medical Science, Tehran, Iran
nassergoodarzi@yahoo.com
10.31661/jbpe.v0i0.2003-1084
Background: Cognitive control of brain regions can be determined by the tasks involving the cognitive control such as the color word Stroop task. Stroop task define the reduction in function in incongruent condition, which requires more attention and control of competitive responses. <br />Objective: The purpose of this study was to evaluate the activity of brain using the Modified Conflict Stroop Task in Military Personnel.<br />Material and Methods: In this applied experimental study, to specify the activity of different regions of brain in response to conflict Persian color-word Stroop task, 20 healthy persons participated in this study. To evaluate selective attention, the traditional color-word Stroop Task Model was modified, and the Stroop test was designed in high- and low-threat zones. We used functional magnetic resonance imaging (fMRI) to evaluate the brain activation during the Stroop task performance. The color-word Stroop task consists of incongruent, congruent, and neutral conditions, and the subjects were requested to carefully choose the correct answer. <br />Results: The mean response time was longer in incongruent condition (867.6±193.5ms) compared to congruent and neutral conditions. Analysis of neuroimaging data revealed that the brain conflict-related regions are activated by the Stroop interference. In incongruent trial, the superior frontal gyrus (SFG) and inferior frontal gyrus (IFG) showed the most active and stronger BOLD responses. In congruent trials, the activation in the brain was less and had difference compared with incongruent trials. <br />Conclusion: Our result offers that the frontal cortex and the anterior cingulate cortex are sensitive to different trials of Persian Stroop task. Using modified Stroop task, we determined the brain responses to the selective attention test.
Stroop Test,Functional MRI,Cognition,Attention,Dorsolateral Prefrontal Cortex
https://jbpe.sums.ac.ir/article_46784.html
https://jbpe.sums.ac.ir/article_46784_2176e5c3b765e0272d995385cafbebf8.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
A Deep Learning Approach to Automatic Recognition of Arcus Senilis
507
512
EN
N
Amini
0000-0001-5586-1666
MSc, Department of Biomedical Engineering, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
nasrin.amini@sbmu.ac.ir
A
Ameri
0000-0001-6518-3184
PhD, Department of Biomedical Engineering, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
aliameri86@gmail.com
10.31661/jbpe.v0i0.2003-1080
Background: Arcus Senilis (AS) appears as a white, grey or blue ring or arc in front of the periphery of the iris, and is a symptom of abnormally high cholesterol in patients under 50 years old. <br />Objective: This work proposes a deep learning approach to automatic recognition of AS in eye images.<br />Material and Methods: In this analytical study, a dataset of 191 eye images (130 normal, 61 with AS) was employed where ¾ of the data were used for training the proposed model and ¼ of the data were used for test, using a 4-fold cross-validation. Due to the limited amount of training data, transfer learning was conducted with AlexNet as the pretrained network. <br />Results: The proposed model achieved an accuracy of 100% in classifying the eye images into normal and AS categories. <br />Conclusion: The excellent performance of the proposed model despite limited training set, demonstrate the efficacy of deep transfer learning in AS recognition in eye images. The proposed approach is preferred to previous methods for AS recognition, as it eliminates cumbersome segmentation and feature engineering processes.
Arcus Senilis,Deep Learning,Transfer Learning,Classification
https://jbpe.sums.ac.ir/article_46594.html
https://jbpe.sums.ac.ir/article_46594_c7a5f8be89d77f2acde9b3fbf65ac97a.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Supervised Algorithms of Machine Learning for the Prediction of Cervical Cancer
513
522
EN
F
Asadi
0000-0003-0939-7983
PhD, Department of Health Information Technology and Management, School of Allied Medical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
asadifar@sbmu.ac.ir
C
Salehnasab
PhD Candidate, Department of Health Information Technology and Management, School of Allied Medical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
cirruse.salehnasab@gmail.com
L
Ajori
MD, PhD, Department of obstetrics and gynaecology, preventative gynaecology Research centre, Shahid Beheshti University of Medical Sciences Tehran, Iran
10.31661/jbpe.v0i0.1912-1027
Background: Compared to other genital cancers, cervical cancer is the most prevalent and the main cause of mortality in females in third-world countries, affected by different factors, including smoking, poor nutritional status, immune-deficiency, long-term use of contraceptives and so on. <br />Objective: The present study was conducted to predict cervical cancer and identify its important predictors using machine learning classification algorithms.<br />Material and Methods: In a cross-sectional study, the data of 145 patients with 23 attributes, which referred to Shohada Hospital Tehran, Iran during 2017–2018, were analyzed by machine learning classification algorithms which included SVM, QUEST, C&R tree, MLP and RBF. The criteria measurement used to evaluate these algorithms included accuracy, sensitivity, specificity and area under the curve (AUC). <br />Results: The accuracy, sensitivity, specificity and AUC of Quest and C&R tree were, respectively 95.55, 90.48, 100, and 95.20, 95.55, 90.48, 100, and 95.20, those of RBF 95.45, 90.00, 100 and 91.50, those of SVM 93.33, 90.48, 95.83 and 95.80 and those of MLP 90.90, 90.00, 91.67 and 91.50 percentage. The important predictors in all the algorithms were found to comprise personal health level, marital status, social status, the dose of contraceptives used, level of education and number of caesarean deliveries. <br />Conclusion: This investigation confirmed that ML can enhance the prediction of cervical cancer. The results of this study showed that Decision Tree algorithms can be applied to identify the most relevant predictors. Moreover, it seems that improving personal health and socio-cultural level of patients can be causing cervical cancer prevention.
Cervical Cancer,Machine Learning,Prediction,Neural networks,Decision Trees,Support Vector Machine
https://jbpe.sums.ac.ir/article_46540.html
https://jbpe.sums.ac.ir/article_46540_075c801f0a8b69ff5a5c9fd771e5d149.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Low Price Foot Pressure Distribution Screening Technique: Optical Podoscope with Accurate Foot Print Segmentation using Hidden Markov Random Field Model
523
536
EN
H
Heravi
0000-0001-9341-3792
PhD Candidate, Department of Electrical Engineering, Sahand University of Technology, Tabriz, Iran
h_heravi@sut.ac.ir
A
Ebrahimi
0000-0003-2207-9306
PhD, Department of Electrical Engineering, Sahand University of Technology, Tabriz, Iran
aebrahimi@sut.ac.ir
S
Nikzad
PhD Candidate, Department of Electrical Engineering, Sahand University of Technology, Tabriz, Iran
s_nikzad@sut.ac.ir
E
Olyaee
BSc, Department of Electrical Engineering, Sahand University of Technology, Tabriz, Iran
olyaee.ehsan@gmail.com
Y
Salek Zamani
MD, Department of physical medicine & Rehabilitation Center, Tabriz Medical Sciences University, Tabriz, Iran
ysz48@yahoo.com
10.31661/jbpe.v0i0.618
Background: Foot pressure assessment systems are widely used to diagnose foot pathologies. The human foot plays an important role in maintaining the biomechanical function of the lower extremities which includes the provision of balance and stabilization of the body during gait. <br />Objective: There are different types of assessment tools with different capabilities which are discussed in detail in this paper. In this project, we introduce a new camera-based pressure distribution estimation system which can give a numerical estimation in addition to giving a visual illustration of pressure distribution of the sole. <br />Material and Methods: In this analytical study we proposed an accurate Foot Print segmentation using hidden Markov Random Field model. In the first step, an image is captured from the traditional Podoscope device. Then, the HMRF-EM image segmentation scheme applies to extract the contacting part of the sole to the ground. Finally, based on a simple calibration method, per mm<sup>2</sup>, pressure estimates to give an accurate pressure distribution measure. <br />Results: A significant and usable estimation of foot pressure has been introduced in this article. The main drawback of introduced systems is the low resolution of sensors which is solved using a high resolution camera as a sensor. Another problem is the patchy edge extracted by the systems which is automatically solved in the proposed device using an accurate image segmentation algorithm.<br />Conclusion: We introduced a camera-based plantar pressure assessment tool which uses HMRF-EM-based method has been explained in more detail which gives a brilliant sole segmentation from the captured images.
Image Processing, Computer-Assisted,Foot Deformities,Rehabilitation,Hidden Markov Random Field
https://jbpe.sums.ac.ir/article_44624.html
https://jbpe.sums.ac.ir/article_44624_45b5d393cf498e76d87d90b813379528.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Abscopal Effect Following Radiation Therapy in Cancer Patients: A New Look from the Immunological Point of View
537
542
EN
J
Welsh
0000-0002-3255-6412
MD, PhD, Department of Radiation Oncology, Edward Hines Jr VA Hospital, Hines, IL 60141, United States
J J
Bevelacqua
PhD, Bevelacqua Resources, Richland, Washington 99352, United States
L
Dobrzyński
PhD, National Centre for Nuclear Research, Otwock-Świerk, Poland
S A R
Mortazavi
0000-0002-1563-6592
MD, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
alirmortazavi@yahoo.com
Sh
Farjadian
PhD, Department of Immunology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
S M J
Mortazavi
0000-0003-0139-2774
PhD, Department of Medical Physics, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
mortazavismj@gmail.com
10.31661/jbpe.v0i0.1066
Abscopal effect, a radiobiology term meaning “away from target”, was practically unheard of just ten years ago. This effect describes the elimination and cure of a non-treated tumor when another part of the body is irradiated. Successful treatment of cancer in patients with multiple metastatic foci has sporadically been reported. Abscopal effect after radiotherapy has been introduced as the key factor which induced an anticancer response in these metastatic lesions. Moreover, not receiving chemotherapy is reported to have a role in cancer regression after radiotherapy. Given this consideration, it can be hypothesized that standard radiotherapy doses, which usually classified as high-dose, may cause cancer cells to expose or release their sequestered antigens that had been previously masked. Furthermore, radiotherapy can decrease the suppressive effect of regulatory T cells which usually down modulate immune responses against cancers. Moreover, some data show that low dose total-body irradiation (TBI) alone (without standard localized high dose radiotherapy) may cause suppression of distant metastasis of tumor cells. Induction of a “whole body abscopal effect” can be involved in suppression of distant metastasis. Here we discuss whether cancer treatments could be more successful if immune system is boosted, not destroyed by the treatments such as chemotherapy.
Immune system,cancer,Radiotherapy,Radiobiology
https://jbpe.sums.ac.ir/article_44582.html
https://jbpe.sums.ac.ir/article_44582_4e0bcf4b9c6af031268822c67274b159.pdf
Shiraz University of Medical Sciences
Journal of Biomedical Physics and Engineering
2251-7200
10
4
2020
08
01
Design and Fabrication of a New Expandable Transtibial Liner with Manual Volume Control: A Prototype
543
548
EN
M J
Nouri
0000-0002-9512-0106
PhD Candidate, Department of Orthotics and Prosthetics, University of Social Welfare and Rehabilitation Science, Tehran, Iran
mjnoori@gmail.com
G
Aminian
0000-0002-7977-4695
PhD, Department of Orthotics and Prosthetics, University of Social Welfare and Rehabilitation Science, Tehran, Iran
gholamrezaaminian@yahoo.com
F
Farahmand
PhD, Department of Mechanical Engineering, Sharif University of Technology, Tehran, Iran
farahmand@sharif.ir
M
Rahgozar
PhD, Department of Biostatistics, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran
m_rahgozar2003@yahoo.com.au
10.31661/jbpe.v0i0.2001-1056
Diurnal volume changes is one of the main factors influencing socket fit in transtibial prosthesis and causing pressure problem issues. Embedded bladder liners have been recently a potential approach to deal with this problem. The aim of this technical note was to introduce a new transtibial silicone liner designed based on hybrid socket theory. <br />To make expandability in the liner, an integrated wax structure was constructed over the selected areas of the positive model and then removed after lamination process. In addition, a mechanical system with manual control was designed to fit the liner with the residual limb volume by pumping the water in or out of the liner through connective tubes. <br />The results showed that this new design had high reliability in maintaining identical surface pressures after volume changes in laboratory trials. Therefore, it seems that selective expandability of this liner would accommodate residual limb volume fluctuations without disturbing effect on preliminary pressure pattern.
Amputation Stumps,Lower Extremity,Transtibial,Volume Fluctuation,Liner,Bladder,Silicones
https://jbpe.sums.ac.ir/article_46785.html
https://jbpe.sums.ac.ir/article_46785_a99ac93a39bb5a797b8c2d6c7a201fba.pdf